Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 AC006455.2-201ENST00000429931 906 ntBASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 AP004607.7-201ENST00000527152 1677 ntBASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 MIR6724-1-201ENST00000616420 92 ntBASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 MIR6724-2-201ENST00000616483 92 ntBASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 MIR6724-4-201ENST00000617390 92 ntBASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 MIR6724-3-201ENST00000622482 92 ntBASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PLK5-205ENST00000642079 1969 ntBASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRBV27A0A0K0K1C4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV27A0A0K0K1C4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 TSPY9P-201ENST00000440215 945 ntBASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 TSPY11P-201ENST00000442607 1045 ntBASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV27A0A0K0K1C4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 AC007952.6-201ENST00000573168 2673 ntBASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 AC003957.1-201ENST00000625108 2673 ntBASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV27A0A0K0K1C4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms