Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MIR4508-201ENST00000584178 70 ntBASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 ABHD17AP5-201ENST00000580133 923 ntBASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV34A0A0B4J273 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 AC137630.3-201ENST00000607245 391 ntBASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV34A0A0B4J273 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 KRT8P33-201ENST00000508125 1423 ntBASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV34A0A0B4J273 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
TRAV34A0A0B4J273 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TRAV34A0A0B4J273 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.18
TRAV34A0A0B4J273 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV34A0A0B4J273 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 AC103724.3-201ENST00000564481 992 ntBASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV34A0A0B4J273 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV34A0A0B4J273 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV34A0A0B4J273 C17orf82-201ENST00000623772 1530 ntBASIC16.19■□□□□ 0.18
TRAV34A0A0B4J273 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV34A0A0B4J273 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV34A0A0B4J273 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms