Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 AC126544.1-201ENST00000580842 1059 ntBASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 AC131212.1-201ENST00000613771 668 ntBASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV3A0A0B4J244 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAV3A0A0B4J244 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV3A0A0B4J244 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
TRAV3A0A0B4J244 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV3A0A0B4J244 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV3A0A0B4J244 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV3A0A0B4J244 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV3A0A0B4J244 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 AC135279.3-201ENST00000610945 1311 ntBASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV3A0A0B4J244 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 AC008764.7-201ENST00000593779 1081 ntBASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV3A0A0B4J244 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 IGHV3-19-201ENST00000521488 291 ntBASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms