Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 EEF1DP3-203ENST00000566025 782 ntBASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC053503.5-201ENST00000601508 636 ntBASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AP004607.4-201ENST00000530158 1459 ntBASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 RARRES2P11-201ENST00000635158 484 ntBASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PKD1P6-201ENST00000343738 4769 ntBASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC004911.1-201ENST00000416316 871 ntBASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 AC004854.2-201ENST00000608450 1441 ntBASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms