Protein–RNA interactions for Protein: A0A087WXM4

Uncharacterized protein, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A087WXM4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
A0A087WXM4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
A0A087WXM4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
A0A087WXM4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
A0A087WXM4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.34■□□□□ 0.69
A0A087WXM4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
A0A087WXM4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.34■□□□□ 0.69
A0A087WXM4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
A0A087WXM4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.34■□□□□ 0.69
A0A087WXM4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
A0A087WXM4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
A0A087WXM4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
A0A087WXM4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
A0A087WXM4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
A0A087WXM4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
A0A087WXM4 AC016575.1-201ENST00000607026 382 ntBASIC19.33■□□□□ 0.68
A0A087WXM4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
A0A087WXM4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
A0A087WXM4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
A0A087WXM4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
A0A087WXM4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
A0A087WXM4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
A0A087WXM4 AC004687.1-201ENST00000579003 1625 ntBASIC19.33■□□□□ 0.68
A0A087WXM4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.32■□□□□ 0.68
A0A087WXM4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.32■□□□□ 0.68
A0A087WXM4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.32■□□□□ 0.68
A0A087WXM4 DUX4L4-201ENST00000566884 1269 ntBASIC19.32■□□□□ 0.68
A0A087WXM4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 AC098818.2-201ENST00000564925 2320 ntBASIC19.32■□□□□ 0.68
A0A087WXM4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
A0A087WXM4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
A0A087WXM4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
A0A087WXM4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.32■□□□□ 0.68
A0A087WXM4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.32■□□□□ 0.68
A0A087WXM4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
A0A087WXM4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.31■□□□□ 0.68
A0A087WXM4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
A0A087WXM4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
A0A087WXM4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
A0A087WXM4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
A0A087WXM4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
A0A087WXM4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.31■□□□□ 0.68
A0A087WXM4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
A0A087WXM4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
A0A087WXM4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.3■□□□□ 0.68
A0A087WXM4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
A0A087WXM4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.3■□□□□ 0.68
A0A087WXM4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
A0A087WXM4 AC027702.1-201ENST00000563810 1770 ntBASIC19.3■□□□□ 0.68
A0A087WXM4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
A0A087WXM4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.3■□□□□ 0.68
A0A087WXM4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.3■□□□□ 0.68
A0A087WXM4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
A0A087WXM4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
A0A087WXM4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
A0A087WXM4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
A0A087WXM4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 AF131216.4-201ENST00000638924 1588 ntBASIC19.29■□□□□ 0.68
A0A087WXM4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
A0A087WXM4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 AC020907.5-201ENST00000624372 1936 ntBASIC19.29■□□□□ 0.68
A0A087WXM4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
A0A087WXM4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
A0A087WXM4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
A0A087WXM4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
A0A087WXM4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
A0A087WXM4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
A0A087WXM4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
A0A087WXM4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
A0A087WXM4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.28■□□□□ 0.68
A0A087WXM4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
A0A087WXM4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
A0A087WXM4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
A0A087WXM4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.28■□□□□ 0.68
A0A087WXM4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
A0A087WXM4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
A0A087WXM4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms