Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 SNX5-217ENST00000606557 1087 ntBASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 AC018445.3-201ENST00000624177 1945 ntBASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV9-2A0A087WT02 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 AFG3L1P-217ENST00000557444 2447 ntBASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 BX323043.1-201ENST00000641006 1765 ntBASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV9-2A0A087WT02 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 AC005703.6-201ENST00000623265 1329 ntBASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 ALDH1A3-203ENST00000557963 1670 ntBASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 AC008406.3-201ENST00000620001 1374 ntBASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 AC087742.1-201ENST00000575880 1738 ntBASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV9-2A0A087WT02 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-2A0A087WT02 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV9-2A0A087WT02 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV9-2A0A087WT02 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV9-2A0A087WT02 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV9-2A0A087WT02 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-2A0A087WT02 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms