Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 AL354811.1-201ENST00000610286 706 ntBASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 AC009237.3-201ENST00000393279 1427 ntBASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 AP006587.3-201ENST00000525742 1516 ntBASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 AC012414.1-201ENST00000556676 535 ntBASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 AL358852.1-201ENST00000623174 1268 ntBASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRB4X5D2U9 FBXW4P1-201ENST00000426721 2239 ntBASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 BX005040.4-201ENST00000637145 1518 ntBASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 AC010542.4-201ENST00000563151 1910 ntBASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.84■□□□□ 0.13
HLA-DRB4X5D2U9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DRB4X5D2U9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DRB4X5D2U9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DRB4X5D2U9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.83■□□□□ 0.13
HLA-DRB4X5D2U9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.83■□□□□ 0.13
HLA-DRB4X5D2U9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DRB4X5D2U9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 IRS3P-201ENST00000223076 1006 ntBASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 AC104564.3-201ENST00000582367 638 ntBASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms