Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
S4R3C0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
S4R3C0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
S4R3C0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.65■□□□□ 0.26
S4R3C0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
S4R3C0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
S4R3C0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
S4R3C0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
S4R3C0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
S4R3C0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
S4R3C0 AC003102.1-202ENST00000563394 1796 ntBASIC16.64■□□□□ 0.25
S4R3C0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.64■□□□□ 0.25
S4R3C0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.64■□□□□ 0.25
S4R3C0 AC105265.2-201ENST00000467189 838 ntBASIC16.64■□□□□ 0.25
S4R3C0 MIR6084-201ENST00000622012 110 ntBASIC16.64■□□□□ 0.25
S4R3C0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.64■□□□□ 0.25
S4R3C0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
S4R3C0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
S4R3C0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
S4R3C0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.63■□□□□ 0.25
S4R3C0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.63■□□□□ 0.25
S4R3C0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
S4R3C0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
S4R3C0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 MIR572-201ENST00000384983 95 ntBASIC16.63■□□□□ 0.25
S4R3C0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.63■□□□□ 0.25
S4R3C0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.63■□□□□ 0.25
S4R3C0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.63■□□□□ 0.25
S4R3C0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.63■□□□□ 0.25
S4R3C0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.63■□□□□ 0.25
S4R3C0 AP006587.3-201ENST00000525742 1516 ntBASIC16.63■□□□□ 0.25
S4R3C0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.63■□□□□ 0.25
S4R3C0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
S4R3C0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.62■□□□□ 0.25
S4R3C0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.62■□□□□ 0.25
S4R3C0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
S4R3C0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.62■□□□□ 0.25
S4R3C0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 AC104564.3-201ENST00000582367 638 ntBASIC16.62■□□□□ 0.25
S4R3C0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.62■□□□□ 0.25
S4R3C0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.62■□□□□ 0.25
S4R3C0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.62■□□□□ 0.25
S4R3C0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.62■□□□□ 0.25
S4R3C0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
S4R3C0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.61■□□□□ 0.25
S4R3C0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.61■□□□□ 0.25
S4R3C0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.61■□□□□ 0.25
S4R3C0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.61■□□□□ 0.25
S4R3C0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
S4R3C0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
S4R3C0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
S4R3C0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.6■□□□□ 0.25
S4R3C0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S4R3C0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S4R3C0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
S4R3C0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S4R3C0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S4R3C0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
S4R3C0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S4R3C0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S4R3C0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.6■□□□□ 0.25
S4R3C0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
S4R3C0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
S4R3C0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.6■□□□□ 0.25
S4R3C0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
S4R3C0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
S4R3C0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
S4R3C0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.59■□□□□ 0.25
S4R3C0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
S4R3C0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
S4R3C0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
S4R3C0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
S4R3C0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.59■□□□□ 0.25
S4R3C0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms