Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.74■□□□□ 0.91
DNMT3AQ9Y6K1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DNMT3AQ9Y6K1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DNMT3AQ9Y6K1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
DNMT3AQ9Y6K1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DNMT3AQ9Y6K1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DNMT3AQ9Y6K1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
DNMT3AQ9Y6K1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 AL137784.2-201ENST00000607332 1000 ntBASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 AC120498.10-201ENST00000621827 505 ntBASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 AC092437.1-201ENST00000624794 1048 ntBASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNMT3AQ9Y6K1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNMT3AQ9Y6K1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 IKBKGP1-201ENST00000612193 1073 ntBASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DNMT3AQ9Y6K1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
DNMT3AQ9Y6K1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DNMT3AQ9Y6K1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 KRT16P2-201ENST00000414673 1423 ntBASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DNMT3AQ9Y6K1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms