Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COPG1Q9Y678 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COPG1Q9Y678 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPG1Q9Y678 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPG1Q9Y678 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COPG1Q9Y678 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPG1Q9Y678 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.74■□□□□ 0.91
COPG1Q9Y678 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.74■□□□□ 0.91
COPG1Q9Y678 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPG1Q9Y678 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.74■□□□□ 0.91
COPG1Q9Y678 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPG1Q9Y678 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPG1Q9Y678 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.74■□□□□ 0.91
COPG1Q9Y678 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.73■□□□□ 0.91
COPG1Q9Y678 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.73■□□□□ 0.91
COPG1Q9Y678 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.73■□□□□ 0.91
COPG1Q9Y678 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COPG1Q9Y678 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPG1Q9Y678 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COPG1Q9Y678 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
COPG1Q9Y678 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.72■□□□□ 0.91
COPG1Q9Y678 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.72■□□□□ 0.91
COPG1Q9Y678 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COPG1Q9Y678 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COPG1Q9Y678 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
COPG1Q9Y678 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
COPG1Q9Y678 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPG1Q9Y678 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPG1Q9Y678 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPG1Q9Y678 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPG1Q9Y678 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPG1Q9Y678 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.71■□□□□ 0.91
COPG1Q9Y678 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.71■□□□□ 0.91
COPG1Q9Y678 AL031602.1-201ENST00000633169 911 ntBASIC20.71■□□□□ 0.91
COPG1Q9Y678 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COPG1Q9Y678 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.71■□□□□ 0.91
COPG1Q9Y678 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
COPG1Q9Y678 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPG1Q9Y678 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COPG1Q9Y678 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COPG1Q9Y678 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
COPG1Q9Y678 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.7■□□□□ 0.91
COPG1Q9Y678 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 AC079089.2-201ENST00000531211 1277 ntBASIC20.7■□□□□ 0.9
COPG1Q9Y678 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 AC136469.2-201ENST00000623944 1028 ntBASIC20.7■□□□□ 0.9
COPG1Q9Y678 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 LINC01521-201ENST00000504184 1943 ntBASIC20.7■□□□□ 0.9
COPG1Q9Y678 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
COPG1Q9Y678 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPG1Q9Y678 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COPG1Q9Y678 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.69■□□□□ 0.9
COPG1Q9Y678 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.69■□□□□ 0.9
COPG1Q9Y678 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COPG1Q9Y678 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 AC233992.3-201ENST00000607491 485 ntBASIC20.69■□□□□ 0.9
COPG1Q9Y678 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPG1Q9Y678 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms