Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC6Q9Y625 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GPC6Q9Y625 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC6Q9Y625 OXCT2P1-201ENST00000447263 1535 ntBASIC19.92■□□□□ 0.78
GPC6Q9Y625 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC6Q9Y625 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC6Q9Y625 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC6Q9Y625 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC6Q9Y625 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC6Q9Y625 EDA-201ENST00000338901 1233 ntBASIC19.91■□□□□ 0.78
GPC6Q9Y625 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 BX842568.3-201ENST00000418104 571 ntBASIC19.91■□□□□ 0.78
GPC6Q9Y625 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC6Q9Y625 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
GPC6Q9Y625 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GPC6Q9Y625 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC6Q9Y625 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
GPC6Q9Y625 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.9■□□□□ 0.78
GPC6Q9Y625 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.9■□□□□ 0.78
GPC6Q9Y625 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.9■□□□□ 0.78
GPC6Q9Y625 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
GPC6Q9Y625 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GPC6Q9Y625 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.89■□□□□ 0.77
GPC6Q9Y625 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
GPC6Q9Y625 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.89■□□□□ 0.77
GPC6Q9Y625 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
GPC6Q9Y625 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 SLC47A1P1-202ENST00000449666 945 ntBASIC19.89■□□□□ 0.77
GPC6Q9Y625 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.89■□□□□ 0.77
GPC6Q9Y625 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.89■□□□□ 0.77
GPC6Q9Y625 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.89■□□□□ 0.77
GPC6Q9Y625 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.89■□□□□ 0.77
GPC6Q9Y625 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GPC6Q9Y625 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.88■□□□□ 0.77
GPC6Q9Y625 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPC6Q9Y625 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPC6Q9Y625 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.88■□□□□ 0.77
GPC6Q9Y625 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GPC6Q9Y625 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
GPC6Q9Y625 AL355001.2-201ENST00000620617 1191 ntBASIC19.88■□□□□ 0.77
GPC6Q9Y625 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPC6Q9Y625 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GPC6Q9Y625 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.88■□□□□ 0.77
GPC6Q9Y625 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.88■□□□□ 0.77
GPC6Q9Y625 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GPC6Q9Y625 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
GPC6Q9Y625 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
GPC6Q9Y625 AC005229.4-201ENST00000610085 2198 ntBASIC19.87■□□□□ 0.77
GPC6Q9Y625 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GPC6Q9Y625 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.87■□□□□ 0.77
GPC6Q9Y625 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GPC6Q9Y625 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.87■□□□□ 0.77
GPC6Q9Y625 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.87■□□□□ 0.77
GPC6Q9Y625 AC104564.3-201ENST00000582367 638 ntBASIC19.87■□□□□ 0.77
GPC6Q9Y625 AC233992.3-201ENST00000607491 485 ntBASIC19.87■□□□□ 0.77
GPC6Q9Y625 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.87■□□□□ 0.77
GPC6Q9Y625 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.87■□□□□ 0.77
GPC6Q9Y625 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GPC6Q9Y625 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
GPC6Q9Y625 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC6Q9Y625 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC6Q9Y625 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
GPC6Q9Y625 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC6Q9Y625 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC6Q9Y625 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms