Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 GUSBP5-202ENST00000510805 1989 ntBASIC20.76■□□□□ 0.91
PCDHGA4Q9Y5G9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 LINC00526-201ENST00000581067 1875 ntBASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGA4Q9Y5G9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA4Q9Y5G9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 AC007375.3-201ENST00000600936 2314 ntBASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 AC026185.1-201ENST00000445748 174 ntBASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA4Q9Y5G9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 AC242852.2-201ENST00000615738 1807 ntBASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 AC104771.1-201ENST00000603335 964 ntBASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 AC073130.3-201ENST00000624389 2278 ntBASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA4Q9Y5G9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 OR7E47P-201ENST00000546390 1422 ntBASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 SMUG1P1-201ENST00000590640 811 ntBASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 TPRG1LP1-201ENST00000598702 760 ntBASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms