Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 AC074183.2-201ENST00000623112 922 ntBASIC19.95■□□□□ 0.78
AP4S1Q9Y587 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 AC006128.1-201ENST00000624704 1661 ntBASIC19.94■□□□□ 0.78
AP4S1Q9Y587 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
AP4S1Q9Y587 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4S1Q9Y587 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP4S1Q9Y587 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 AC009102.2-201ENST00000606772 1639 ntBASIC19.91■□□□□ 0.78
AP4S1Q9Y587 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP4S1Q9Y587 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms