Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 BX842568.3-201ENST00000418104 571 ntBASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.86■□□□□ 0.29
LSM4Q9Y4Z0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LSM4Q9Y4Z0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 AC006455.2-201ENST00000429931 906 ntBASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 MIR3181-201ENST00000578512 73 ntBASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 OR7E47P-201ENST00000546390 1422 ntBASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 OXCT2P1-201ENST00000447263 1535 ntBASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSM4Q9Y4Z0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
LSM4Q9Y4Z0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
LSM4Q9Y4Z0 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSM4Q9Y4Z0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms