Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D4Q9Y2X8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D4Q9Y2X8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D4Q9Y2X8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.7□□□□□ -0.06
UBE2D4Q9Y2X8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D4Q9Y2X8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D4Q9Y2X8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D4Q9Y2X8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 AC099791.2-201ENST00000605725 427 ntBASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D4Q9Y2X8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.67□□□□□ -0.06
UBE2D4Q9Y2X8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 GABARAPL3-202ENST00000624044 1851 ntBASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 AP004607.7-201ENST00000527152 1677 ntBASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 MIR3181-201ENST00000578512 73 ntBASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBE2D4Q9Y2X8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 AC006128.1-201ENST00000624704 1661 ntBASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms