Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FNDC3AQ9Y2H6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.55■■□□□ 1.04
FNDC3AQ9Y2H6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FNDC3AQ9Y2H6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.55■■□□□ 1.04
FNDC3AQ9Y2H6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FNDC3AQ9Y2H6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 AL109923.1-201ENST00000618799 583 ntBASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FNDC3AQ9Y2H6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 AP004607.7-201ENST00000527152 1677 ntBASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 ABHD17AP1-201ENST00000358206 933 ntBASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FNDC3AQ9Y2H6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FNDC3AQ9Y2H6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
FNDC3AQ9Y2H6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.52■■□□□ 1.03
FNDC3AQ9Y2H6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.52■■□□□ 1.03
FNDC3AQ9Y2H6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FNDC3AQ9Y2H6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 MIR663A-201ENST00000385250 93 ntBASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 NCF1B-203ENST00000435988 1254 ntBASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 AC011767.1-201ENST00000617410 1153 ntBASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FNDC3AQ9Y2H6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms