Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.96■■□□□ 1.11
AP4E1Q9UPM8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
AP4E1Q9UPM8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
AP4E1Q9UPM8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 AC079140.4-201ENST00000507448 529 ntBASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
AP4E1Q9UPM8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
AP4E1Q9UPM8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
AP4E1Q9UPM8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 TERF1P2-201ENST00000583350 1212 ntBASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.92■■□□□ 1.1
AP4E1Q9UPM8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 KRT87P-202ENST00000534226 1464 ntBASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 EEF1DP3-203ENST00000566025 782 ntBASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 CCDC92B-201ENST00000575506 885 ntBASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.91■■□□□ 1.1
AP4E1Q9UPM8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 AL137060.1-201ENST00000618151 2648 ntBASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP4E1Q9UPM8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
AP4E1Q9UPM8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
AP4E1Q9UPM8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.89■■□□□ 1.1
AP4E1Q9UPM8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
AP4E1Q9UPM8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms