Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHGC3Q9UN70 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGC3Q9UN70 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGC3Q9UN70 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGC3Q9UN70 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGC3Q9UN70 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGC3Q9UN70 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGC3Q9UN70 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 FEM1AP4-201ENST00000443167 1987 ntBASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 KRT18P14-201ENST00000534205 1250 ntBASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGC3Q9UN70 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGC3Q9UN70 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGC3Q9UN70 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 AC019069.1-201ENST00000610008 1333 ntBASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGC3Q9UN70 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDHGC3Q9UN70 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGC3Q9UN70 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 AC097381.1-201ENST00000429019 1296 ntBASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 AC138907.5-202ENST00000569484 235 ntBASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 AL024507.2-201ENST00000606070 2574 ntBASIC22.32■■□□□ 1.16
PCDHGC3Q9UN70 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 MIR6821-201ENST00000617625 74 ntBASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms