Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC40.42■■■■■ 4.06
SHROOM4Q9ULL8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 BX276092.2-201ENST00000417668 665 ntBASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 AP006587.3-201ENST00000525742 1516 ntBASIC40.41■■■■■ 4.06
SHROOM4Q9ULL8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 AC097658.1-201ENST00000475555 843 ntBASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
SHROOM4Q9ULL8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC40.39■■■■■ 4.06
SHROOM4Q9ULL8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC40.39■■■■■ 4.06
SHROOM4Q9ULL8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC40.39■■■■■ 4.06
SHROOM4Q9ULL8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC40.39■■■■■ 4.06
SHROOM4Q9ULL8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC40.39■■■■■ 4.06
SHROOM4Q9ULL8 AC073648.6-201ENST00000641589 218 ntBASIC40.39■■■■■ 4.06
SHROOM4Q9ULL8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
SHROOM4Q9ULL8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.06
SHROOM4Q9ULL8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.05
SHROOM4Q9ULL8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.05
SHROOM4Q9ULL8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.05
SHROOM4Q9ULL8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC40.37■■■■■ 4.05
SHROOM4Q9ULL8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC40.37■■■■■ 4.05
SHROOM4Q9ULL8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
SHROOM4Q9ULL8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC40.37■■■■■ 4.05
SHROOM4Q9ULL8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC40.37■■■■■ 4.05
SHROOM4Q9ULL8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
SHROOM4Q9ULL8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC40.37■■■■■ 4.05
SHROOM4Q9ULL8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 AL162412.1-201ENST00000567129 965 ntBASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC40.36■■■■■ 4.05
SHROOM4Q9ULL8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
SHROOM4Q9ULL8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
SHROOM4Q9ULL8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC40.35■■■■■ 4.05
SHROOM4Q9ULL8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
SHROOM4Q9ULL8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC40.35■■■■■ 4.05
SHROOM4Q9ULL8 UBE2SP1-201ENST00000450587 669 ntBASIC40.35■■■■■ 4.05
SHROOM4Q9ULL8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC40.35■■■■■ 4.05
SHROOM4Q9ULL8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC40.35■■■■■ 4.05
SHROOM4Q9ULL8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC40.34■■■■■ 4.05
SHROOM4Q9ULL8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
SHROOM4Q9ULL8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC40.34■■■■■ 4.05
SHROOM4Q9ULL8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC40.34■■■■■ 4.05
SHROOM4Q9ULL8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC40.34■■■■■ 4.05
SHROOM4Q9ULL8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 MIR1224-201ENST00000408193 85 ntBASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 MME-217ENST00000616757 1315 ntTSL 5 BASIC40.33■■■■■ 4.05
SHROOM4Q9ULL8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC40.32■■■■■ 4.05
SHROOM4Q9ULL8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC40.32■■■■■ 4.05
SHROOM4Q9ULL8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC40.32■■■■■ 4.05
SHROOM4Q9ULL8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC40.32■■■■■ 4.05
SHROOM4Q9ULL8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.05
SHROOM4Q9ULL8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC40.32■■■■■ 4.04
SHROOM4Q9ULL8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC40.32■■■■■ 4.04
SHROOM4Q9ULL8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
SHROOM4Q9ULL8 MIR4497-201ENST00000583208 89 ntBASIC40.32■■■■■ 4.04
SHROOM4Q9ULL8 AC010331.1-201ENST00000611423 582 ntBASIC40.32■■■■■ 4.04
SHROOM4Q9ULL8 AL359736.2-201ENST00000621992 437 ntBASIC40.32■■■■■ 4.04
SHROOM4Q9ULL8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC40.32■■■■■ 4.04
SHROOM4Q9ULL8 AC139530.1-201ENST00000575312 1977 ntBASIC40.31■■■■■ 4.04
SHROOM4Q9ULL8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC40.31■■■■■ 4.04
SHROOM4Q9ULL8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC40.31■■■■■ 4.04
SHROOM4Q9ULL8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC40.31■■■■■ 4.04
SHROOM4Q9ULL8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC40.31■■■■■ 4.04
SHROOM4Q9ULL8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC40.3■■■■■ 4.04
SHROOM4Q9ULL8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
SHROOM4Q9ULL8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC40.3■■■■■ 4.04
SHROOM4Q9ULL8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC40.3■■■■■ 4.04
SHROOM4Q9ULL8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC40.3■■■■■ 4.04
SHROOM4Q9ULL8 MIR718-201ENST00000390190 70 ntBASIC40.3■■■■■ 4.04
SHROOM4Q9ULL8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC40.3■■■■■ 4.04
SHROOM4Q9ULL8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC40.3■■■■■ 4.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms