Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA9Q9UGM1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA9Q9UGM1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA9Q9UGM1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.25■□□□□ 0.67
CHRNA9Q9UGM1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA9Q9UGM1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 LINC02228-203ENST00000641970 1355 ntBASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 YBX1P1-201ENST00000445822 960 ntBASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 PKD1P6-201ENST00000343738 4769 ntBASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 AC019069.1-201ENST00000610008 1333 ntBASIC19.23■□□□□ 0.67
CHRNA9Q9UGM1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 AC123595.1-201ENST00000440769 1046 ntBASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.22■□□□□ 0.67
CHRNA9Q9UGM1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA9Q9UGM1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms