Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 AC233723.2-201ENST00000623798 2106 ntBASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 FAM99A-202ENST00000538190 1989 ntBASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 MIR663A-201ENST00000385250 93 ntBASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 POU5F1P4-201ENST00000413175 1085 ntBASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 HLA-L-209ENST00000420110 1011 ntBASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 AC010536.3-201ENST00000620306 533 ntBASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 AC120498.10-201ENST00000621827 505 ntBASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE7Q9UBL6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 AC007322.1-201ENST00000426983 750 ntBASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 GUSBP5-202ENST00000510805 1989 ntBASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE7Q9UBL6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.53■□□□□ 0.88
CPNE7Q9UBL6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 AC010542.4-201ENST00000563151 1910 ntBASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE7Q9UBL6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CPNE7Q9UBL6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE7Q9UBL6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 NCF1B-203ENST00000435988 1254 ntBASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 CNN2P6-201ENST00000439038 900 ntBASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 TERF1P5-201ENST00000477545 1207 ntBASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 AC005181.1-201ENST00000604782 1256 ntBASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE7Q9UBL6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms