Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 AC003102.1-202ENST00000563394 1796 ntBASIC19.66■□□□□ 0.74
RLIMQ9NVW2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 AC106739.1-201ENST00000617035 715 ntBASIC19.66■□□□□ 0.74
RLIMQ9NVW2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RLIMQ9NVW2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 AC099791.1-201ENST00000416440 715 ntBASIC19.65■□□□□ 0.74
RLIMQ9NVW2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 SMUG1P1-201ENST00000590640 811 ntBASIC19.65■□□□□ 0.74
RLIMQ9NVW2 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.65■□□□□ 0.74
RLIMQ9NVW2 AC110285.6-201ENST00000617652 491 ntBASIC19.65■□□□□ 0.74
RLIMQ9NVW2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RLIMQ9NVW2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RLIMQ9NVW2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.64■□□□□ 0.74
RLIMQ9NVW2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.64■□□□□ 0.74
RLIMQ9NVW2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RLIMQ9NVW2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RLIMQ9NVW2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RLIMQ9NVW2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 AL034346.1-201ENST00000568244 1277 ntBASIC19.64■□□□□ 0.73
RLIMQ9NVW2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 AC104564.3-201ENST00000582367 638 ntBASIC19.64■□□□□ 0.73
RLIMQ9NVW2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.64■□□□□ 0.73
RLIMQ9NVW2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 IGHV3-19-201ENST00000521488 291 ntBASIC19.63■□□□□ 0.73
RLIMQ9NVW2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RLIMQ9NVW2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RLIMQ9NVW2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms