Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 SUDS3P1-201ENST00000505831 966 ntBASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 IGHV3-19-201ENST00000521488 291 ntBASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 AC104564.3-201ENST00000582367 638 ntBASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 AP004607.7-201ENST00000527152 1677 ntBASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 AC091305.1-201ENST00000479476 895 ntBASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.61■□□□□ 0.73
CTPS2Q9NRF8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 AC142381.2-201ENST00000566120 298 ntBASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 AC005837.3-201ENST00000612163 286 ntBASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.6■□□□□ 0.73
CTPS2Q9NRF8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 TSPY26P-201ENST00000476365 1326 ntBASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 MIR638-201ENST00000385237 100 ntBASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTPS2Q9NRF8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTPS2Q9NRF8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.58■□□□□ 0.73
CTPS2Q9NRF8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.58■□□□□ 0.73
CTPS2Q9NRF8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.58■□□□□ 0.73
CTPS2Q9NRF8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTPS2Q9NRF8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTPS2Q9NRF8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTPS2Q9NRF8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTPS2Q9NRF8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTPS2Q9NRF8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTPS2Q9NRF8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTPS2Q9NRF8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTPS2Q9NRF8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.56■□□□□ 0.72
CTPS2Q9NRF8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms