Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC120498.10-201ENST00000621827 505 ntBASIC25.15■■□□□ 1.62
DDX4Q9NQI0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX4Q9NQI0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.15■■□□□ 1.62
DDX4Q9NQI0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
DDX4Q9NQI0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.14■■□□□ 1.62
DDX4Q9NQI0 KRT16P2-201ENST00000414673 1423 ntBASIC25.14■■□□□ 1.62
DDX4Q9NQI0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX4Q9NQI0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX4Q9NQI0 MKRN4P-201ENST00000444706 1521 ntBASIC25.14■■□□□ 1.62
DDX4Q9NQI0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
DDX4Q9NQI0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX4Q9NQI0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.14■■□□□ 1.62
DDX4Q9NQI0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
DDX4Q9NQI0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 OR10C1-204ENST00000622521 1039 ntBASIC25.13■■□□□ 1.61
DDX4Q9NQI0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.13■■□□□ 1.61
DDX4Q9NQI0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.12■■□□□ 1.61
DDX4Q9NQI0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.11■■□□□ 1.61
DDX4Q9NQI0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX4Q9NQI0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX4Q9NQI0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX4Q9NQI0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX4Q9NQI0 TMEM191A-211ENST00000637163 1067 ntBASIC25.11■■□□□ 1.61
DDX4Q9NQI0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX4Q9NQI0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX4Q9NQI0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX4Q9NQI0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
DDX4Q9NQI0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
DDX4Q9NQI0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX4Q9NQI0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
DDX4Q9NQI0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX4Q9NQI0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX4Q9NQI0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX4Q9NQI0 AC010542.4-201ENST00000563151 1910 ntBASIC25.1■■□□□ 1.61
DDX4Q9NQI0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX4Q9NQI0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 AL512625.2-201ENST00000417533 625 ntBASIC25.09■■□□□ 1.61
DDX4Q9NQI0 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.09■■□□□ 1.61
DDX4Q9NQI0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX4Q9NQI0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX4Q9NQI0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
DDX4Q9NQI0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX4Q9NQI0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
DDX4Q9NQI0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
DDX4Q9NQI0 MIR4758-201ENST00000577688 71 ntBASIC25.08■■□□□ 1.61
DDX4Q9NQI0 AC069236.1-201ENST00000604339 616 ntBASIC25.08■■□□□ 1.61
DDX4Q9NQI0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.08■■□□□ 1.61
DDX4Q9NQI0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.08■■□□□ 1.61
DDX4Q9NQI0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX4Q9NQI0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
DDX4Q9NQI0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 AC243732.1-201ENST00000612648 864 ntBASIC25.07■■□□□ 1.6
DDX4Q9NQI0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX4Q9NQI0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX4Q9NQI0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.06■■□□□ 1.6
DDX4Q9NQI0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms