Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC52A3Q9NQ40 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC52A3Q9NQ40 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 AC136469.2-201ENST00000623944 1028 ntBASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC52A3Q9NQ40 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 AL121603.2-201ENST00000557373 2117 ntBASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC52A3Q9NQ40 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC52A3Q9NQ40 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC52A3Q9NQ40 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 AC011298.3-201ENST00000615796 283 ntBASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SLC52A3Q9NQ40 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 SMUG1P1-201ENST00000590640 811 ntBASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 MIR4466-201ENST00000606121 54 ntBASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC52A3Q9NQ40 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms