Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD8Q9HCK8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20■□□□□ 0.79
CHD8Q9HCK8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20■□□□□ 0.79
CHD8Q9HCK8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD8Q9HCK8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHD8Q9HCK8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20■□□□□ 0.79
CHD8Q9HCK8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20■□□□□ 0.79
CHD8Q9HCK8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHD8Q9HCK8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20■□□□□ 0.79
CHD8Q9HCK8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20■□□□□ 0.79
CHD8Q9HCK8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20■□□□□ 0.79
CHD8Q9HCK8 AL591742.1-201ENST00000604433 565 ntBASIC20■□□□□ 0.79
CHD8Q9HCK8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20■□□□□ 0.79
CHD8Q9HCK8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
CHD8Q9HCK8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20■□□□□ 0.79
CHD8Q9HCK8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD8Q9HCK8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD8Q9HCK8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 GPALPP1-207ENST00000611650 899 ntBASIC19.99■□□□□ 0.79
CHD8Q9HCK8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CHD8Q9HCK8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHD8Q9HCK8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.98■□□□□ 0.79
CHD8Q9HCK8 DUSP5P1-201ENST00000441325 1139 ntBASIC19.98■□□□□ 0.79
CHD8Q9HCK8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.98■□□□□ 0.79
CHD8Q9HCK8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD8Q9HCK8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
CHD8Q9HCK8 AC239809.2-201ENST00000415381 517 ntBASIC19.98■□□□□ 0.79
CHD8Q9HCK8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.98■□□□□ 0.79
CHD8Q9HCK8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHD8Q9HCK8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD8Q9HCK8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 EEF1DP3-203ENST00000566025 782 ntBASIC19.97■□□□□ 0.79
CHD8Q9HCK8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD8Q9HCK8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD8Q9HCK8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD8Q9HCK8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD8Q9HCK8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD8Q9HCK8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD8Q9HCK8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD8Q9HCK8 RARRES2P10-201ENST00000564312 460 ntBASIC19.96■□□□□ 0.79
CHD8Q9HCK8 AC092368.3-202ENST00000574180 1591 ntBASIC19.96■□□□□ 0.79
CHD8Q9HCK8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD8Q9HCK8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.95■□□□□ 0.78
CHD8Q9HCK8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 AC124016.1-201ENST00000609552 612 ntBASIC19.95■□□□□ 0.78
CHD8Q9HCK8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD8Q9HCK8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 KRT16P2-201ENST00000414673 1423 ntBASIC19.94■□□□□ 0.78
CHD8Q9HCK8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD8Q9HCK8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms