Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
ZFYVE28Q9HCC9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 FAM210CP-201ENST00000445714 574 ntBASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZFYVE28Q9HCC9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 C1QBPP2-201ENST00000528754 825 ntBASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 HLA-B-256ENST00000639848 1089 ntBASIC24.38■■□□□ 1.49
ZFYVE28Q9HCC9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 KRT17P1-201ENST00000399211 1546 ntBASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZFYVE28Q9HCC9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 REXO1L12P-201ENST00000622156 912 ntBASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.36■■□□□ 1.49
ZFYVE28Q9HCC9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 AC211429.1-201ENST00000415277 523 ntBASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 KRT17P3-201ENST00000420566 1262 ntBASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 AL355472.2-201ENST00000422958 438 ntBASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 CYP2T3P-201ENST00000601990 817 ntBASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.35■■□□□ 1.49
ZFYVE28Q9HCC9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 Z99916.2-201ENST00000604037 246 ntBASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZFYVE28Q9HCC9 ANOS2P-203ENST00000472227 1816 ntBASIC24.33■■□□□ 1.49
ZFYVE28Q9HCC9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZFYVE28Q9HCC9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZFYVE28Q9HCC9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
ZFYVE28Q9HCC9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
ZFYVE28Q9HCC9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.33■■□□□ 1.49
ZFYVE28Q9HCC9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.33■■□□□ 1.49
ZFYVE28Q9HCC9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.33■■□□□ 1.49
ZFYVE28Q9HCC9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms