Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC68Q9H2F9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC68Q9H2F9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC68Q9H2F9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC68Q9H2F9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC68Q9H2F9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC68Q9H2F9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC68Q9H2F9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC68Q9H2F9 AC009237.3-201ENST00000393279 1427 ntBASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 Z98882.1-201ENST00000622160 2253 ntBASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 AL136967.2-201ENST00000623968 743 ntBASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC68Q9H2F9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 AC003102.1-202ENST00000563394 1796 ntBASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 MIR572-201ENST00000384983 95 ntBASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 AC142381.2-201ENST00000566120 298 ntBASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 AL031432.3-201ENST00000607698 485 ntBASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 AC026310.3-201ENST00000625186 2373 ntBASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC68Q9H2F9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC68Q9H2F9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 AL121603.2-201ENST00000557373 2117 ntBASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC68Q9H2F9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC68Q9H2F9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC68Q9H2F9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC68Q9H2F9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC68Q9H2F9 SUDS3P1-201ENST00000505831 966 ntBASIC21.08■□□□□ 0.97
CCDC68Q9H2F9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC68Q9H2F9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC68Q9H2F9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC68Q9H2F9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC68Q9H2F9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC68Q9H2F9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms