Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS33BQ9H267 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS33BQ9H267 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
VPS33BQ9H267 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS33BQ9H267 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS33BQ9H267 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS33BQ9H267 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.73■■□□□ 1.71
VPS33BQ9H267 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS33BQ9H267 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.73■■□□□ 1.71
VPS33BQ9H267 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
VPS33BQ9H267 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC25.73■■□□□ 1.71
VPS33BQ9H267 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.73■■□□□ 1.71
VPS33BQ9H267 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS33BQ9H267 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.73■■□□□ 1.71
VPS33BQ9H267 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
VPS33BQ9H267 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS33BQ9H267 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.72■■□□□ 1.71
VPS33BQ9H267 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.72■■□□□ 1.71
VPS33BQ9H267 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.72■■□□□ 1.71
VPS33BQ9H267 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.72■■□□□ 1.71
VPS33BQ9H267 AC060766.5-201ENST00000590539 871 ntBASIC25.72■■□□□ 1.71
VPS33BQ9H267 HLA-B-256ENST00000639848 1089 ntBASIC25.72■■□□□ 1.71
VPS33BQ9H267 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.72■■□□□ 1.71
VPS33BQ9H267 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.72■■□□□ 1.71
VPS33BQ9H267 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
VPS33BQ9H267 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS33BQ9H267 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 AC008403.3-201ENST00000598924 454 ntBASIC25.71■■□□□ 1.71
VPS33BQ9H267 AL359736.2-201ENST00000621992 437 ntBASIC25.71■■□□□ 1.71
VPS33BQ9H267 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS33BQ9H267 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
VPS33BQ9H267 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS33BQ9H267 AC137767.1-201ENST00000602918 1920 ntBASIC25.71■■□□□ 1.71
VPS33BQ9H267 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
VPS33BQ9H267 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.71
VPS33BQ9H267 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
VPS33BQ9H267 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.7■■□□□ 1.71
VPS33BQ9H267 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
VPS33BQ9H267 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
VPS33BQ9H267 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS33BQ9H267 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
VPS33BQ9H267 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.7■■□□□ 1.7
VPS33BQ9H267 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.7■■□□□ 1.7
VPS33BQ9H267 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS33BQ9H267 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS33BQ9H267 AC061975.6-201ENST00000579045 1553 ntBASIC25.69■■□□□ 1.7
VPS33BQ9H267 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS33BQ9H267 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS33BQ9H267 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
VPS33BQ9H267 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS33BQ9H267 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS33BQ9H267 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
VPS33BQ9H267 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS33BQ9H267 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS33BQ9H267 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
VPS33BQ9H267 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS33BQ9H267 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.68■■□□□ 1.7
VPS33BQ9H267 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.68■■□□□ 1.7
VPS33BQ9H267 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS33BQ9H267 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS33BQ9H267 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS33BQ9H267 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
VPS33BQ9H267 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS33BQ9H267 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
VPS33BQ9H267 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS33BQ9H267 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
VPS33BQ9H267 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS33BQ9H267 MIR718-201ENST00000390190 70 ntBASIC25.67■■□□□ 1.7
VPS33BQ9H267 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.67■■□□□ 1.7
VPS33BQ9H267 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.67■■□□□ 1.7
VPS33BQ9H267 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VPS33BQ9H267 CYP2T3P-201ENST00000601990 817 ntBASIC25.67■■□□□ 1.7
VPS33BQ9H267 KRT17P1-201ENST00000399211 1546 ntBASIC25.67■■□□□ 1.7
VPS33BQ9H267 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS33BQ9H267 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS33BQ9H267 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS33BQ9H267 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
VPS33BQ9H267 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS33BQ9H267 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS33BQ9H267 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.66■■□□□ 1.7
VPS33BQ9H267 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
VPS33BQ9H267 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.66■■□□□ 1.7
VPS33BQ9H267 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS33BQ9H267 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms