Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.75■■□□□ 1.23
CDH23Q9H251 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 TSPY7P-201ENST00000431358 1114 ntBASIC22.75■■□□□ 1.23
CDH23Q9H251 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 TSPY15P-201ENST00000457163 923 ntBASIC22.75■■□□□ 1.23
CDH23Q9H251 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.75■■□□□ 1.23
CDH23Q9H251 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
CDH23Q9H251 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDH23Q9H251 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDH23Q9H251 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDH23Q9H251 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.74■■□□□ 1.23
CDH23Q9H251 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.74■■□□□ 1.23
CDH23Q9H251 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDH23Q9H251 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDH23Q9H251 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.74■■□□□ 1.23
CDH23Q9H251 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.74■■□□□ 1.23
CDH23Q9H251 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.74■■□□□ 1.23
CDH23Q9H251 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.74■■□□□ 1.23
CDH23Q9H251 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDH23Q9H251 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CDH23Q9H251 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDH23Q9H251 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.73■■□□□ 1.23
CDH23Q9H251 AC233702.5-201ENST00000584107 538 ntBASIC22.73■■□□□ 1.23
CDH23Q9H251 AC069544.1-201ENST00000609399 999 ntBASIC22.73■■□□□ 1.23
CDH23Q9H251 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDH23Q9H251 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
CDH23Q9H251 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.73■■□□□ 1.23
CDH23Q9H251 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDH23Q9H251 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.73■■□□□ 1.23
CDH23Q9H251 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDH23Q9H251 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CDH23Q9H251 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH23Q9H251 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH23Q9H251 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CDH23Q9H251 AC012618.2-201ENST00000428058 849 ntBASIC22.72■■□□□ 1.23
CDH23Q9H251 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.72■■□□□ 1.23
CDH23Q9H251 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.72■■□□□ 1.23
CDH23Q9H251 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.72■■□□□ 1.23
CDH23Q9H251 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH23Q9H251 LINC01960-201ENST00000563759 1884 ntBASIC22.72■■□□□ 1.23
CDH23Q9H251 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.72■■□□□ 1.23
CDH23Q9H251 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDH23Q9H251 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.72■■□□□ 1.23
CDH23Q9H251 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH23Q9H251 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDH23Q9H251 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.72■■□□□ 1.23
CDH23Q9H251 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.72■■□□□ 1.23
CDH23Q9H251 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH23Q9H251 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDH23Q9H251 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.71■■□□□ 1.23
CDH23Q9H251 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH23Q9H251 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CDH23Q9H251 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH23Q9H251 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.71■■□□□ 1.23
CDH23Q9H251 AC133561.5-201ENST00000635547 218 ntBASIC22.71■■□□□ 1.23
CDH23Q9H251 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH23Q9H251 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.71■■□□□ 1.23
CDH23Q9H251 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CDH23Q9H251 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
CDH23Q9H251 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.23
CDH23Q9H251 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CDH23Q9H251 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDH23Q9H251 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDH23Q9H251 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
CDH23Q9H251 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
CDH23Q9H251 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDH23Q9H251 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDH23Q9H251 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDH23Q9H251 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDH23Q9H251 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDH23Q9H251 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDH23Q9H251 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.7■■□□□ 1.22
CDH23Q9H251 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.7■■□□□ 1.22
CDH23Q9H251 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.7■■□□□ 1.22
CDH23Q9H251 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH23Q9H251 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CDH23Q9H251 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH23Q9H251 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.69■■□□□ 1.22
CDH23Q9H251 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.69■■□□□ 1.22
CDH23Q9H251 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH23Q9H251 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.69■■□□□ 1.22
CDH23Q9H251 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH23Q9H251 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.69■■□□□ 1.22
CDH23Q9H251 AP003733.4-201ENST00000623785 1697 ntBASIC22.69■■□□□ 1.22
CDH23Q9H251 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH23Q9H251 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.69■■□□□ 1.22
CDH23Q9H251 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.69■■□□□ 1.22
CDH23Q9H251 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.69■■□□□ 1.22
CDH23Q9H251 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH23Q9H251 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH23Q9H251 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
CDH23Q9H251 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.68■■□□□ 1.22
CDH23Q9H251 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH23Q9H251 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.68■■□□□ 1.22
CDH23Q9H251 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms