Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.33■■□□□ 1.33
FAM49AQ9H0Q0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
FAM49AQ9H0Q0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.33■■□□□ 1.33
FAM49AQ9H0Q0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.33■■□□□ 1.33
FAM49AQ9H0Q0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
FAM49AQ9H0Q0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
FAM49AQ9H0Q0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FAM49AQ9H0Q0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 AC069152.1-201ENST00000438030 544 ntBASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 AC007322.4-201ENST00000509611 723 ntBASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 KRT18P6-201ENST00000555540 1265 ntBASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 AC016405.3-201ENST00000607710 860 ntBASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
FAM49AQ9H0Q0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 AC026471.6-201ENST00000622954 1905 ntBASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FAM49AQ9H0Q0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 KRT16P2-201ENST00000414673 1423 ntBASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 AC093787.1-201ENST00000450396 207 ntBASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 AC008694.1-202ENST00000636953 945 ntBASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
FAM49AQ9H0Q0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 MKRN4P-201ENST00000444706 1521 ntBASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 TSPY20P-201ENST00000450910 630 ntBASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 AC133041.1-202ENST00000642053 222 ntBASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.28■■□□□ 1.32
FAM49AQ9H0Q0 AC127496.7-201ENST00000625110 1798 ntBASIC23.27■■□□□ 1.32
FAM49AQ9H0Q0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FAM49AQ9H0Q0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
FAM49AQ9H0Q0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FAM49AQ9H0Q0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FAM49AQ9H0Q0 AC069236.1-201ENST00000604339 616 ntBASIC23.27■■□□□ 1.32
FAM49AQ9H0Q0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
FAM49AQ9H0Q0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.27■■□□□ 1.32
FAM49AQ9H0Q0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FAM49AQ9H0Q0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FAM49AQ9H0Q0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FAM49AQ9H0Q0 RBM17P2-201ENST00000616397 1405 ntBASIC23.26■■□□□ 1.31
FAM49AQ9H0Q0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.26■■□□□ 1.31
FAM49AQ9H0Q0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.26■■□□□ 1.31
FAM49AQ9H0Q0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FAM49AQ9H0Q0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.26■■□□□ 1.31
FAM49AQ9H0Q0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms