Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 AP001412.1-201ENST00000608405 714 ntBASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.23■□□□□ 0.83
CNTNAP3Q9BZ76 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3Q9BZ76 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP3Q9BZ76 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP3Q9BZ76 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP3Q9BZ76 LSM12P1-201ENST00000411836 588 ntBASIC20.21■□□□□ 0.83
CNTNAP3Q9BZ76 AC069544.1-201ENST00000609399 999 ntBASIC20.21■□□□□ 0.83
CNTNAP3Q9BZ76 OXCT2P1-201ENST00000447263 1535 ntBASIC20.21■□□□□ 0.83
CNTNAP3Q9BZ76 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 AL353708.3-201ENST00000610272 989 ntBASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3Q9BZ76 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 AC026396.1-201ENST00000419388 421 ntBASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 KRT126P-201ENST00000549467 1181 ntBASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 HLA-B-256ENST00000639848 1089 ntBASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3Q9BZ76 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CNTNAP3Q9BZ76 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms