Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2Q9BSQ5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2Q9BSQ5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2Q9BSQ5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2Q9BSQ5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2Q9BSQ5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.82■□□□□ 0.92
CCM2Q9BSQ5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 KRT19P1-201ENST00000405746 1186 ntBASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 AC104187.1-201ENST00000607510 612 ntBASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2Q9BSQ5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.8■□□□□ 0.92
CCM2Q9BSQ5 AC244015.2-201ENST00000616358 1861 ntBASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 KRT18P61-201ENST00000585825 1298 ntBASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2Q9BSQ5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 AC138907.5-202ENST00000569484 235 ntBASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCM2Q9BSQ5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms