Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 AC009237.3-201ENST00000393279 1427 ntBASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 AP004607.7-201ENST00000527152 1677 ntBASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 AC080038.3-201ENST00000623346 1952 ntBASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF1Q9BSM1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 AC005224.4-201ENST00000583262 1652 ntBASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF1Q9BSM1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.64■□□□□ 0.42
PCGF1Q9BSM1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF1Q9BSM1 AL121603.2-201ENST00000557373 2117 ntBASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 AC004854.2-201ENST00000608450 1441 ntBASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF1Q9BSM1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 AC016769.1-201ENST00000409132 1010 ntBASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 AC004911.1-201ENST00000416316 871 ntBASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.62■□□□□ 0.41
PCGF1Q9BSM1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms