Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MFSD11-216ENST00000590393 1141 ntBASIC22.28■■□□□ 1.16
SMOQ99835 AC080038.1-201ENST00000611274 1154 ntBASIC22.28■■□□□ 1.16
SMOQ99835 BID-214ENST00000617586 542 ntTSL 5 BASIC22.28■■□□□ 1.16
SMOQ99835 MYCNOS-205ENST00000641950 531 ntBASIC22.28■■□□□ 1.16
SMOQ99835 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMOQ99835 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMOQ99835 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMOQ99835 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMOQ99835 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMOQ99835 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMOQ99835 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
SMOQ99835 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMOQ99835 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMOQ99835 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.28■■□□□ 1.16
SMOQ99835 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SMOQ99835 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMOQ99835 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
SMOQ99835 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMOQ99835 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMOQ99835 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.27■■□□□ 1.16
SMOQ99835 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
SMOQ99835 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.27■■□□□ 1.16
SMOQ99835 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMOQ99835 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMOQ99835 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.27■■□□□ 1.16
SMOQ99835 AC061975.6-201ENST00000579045 1553 ntBASIC22.27■■□□□ 1.16
SMOQ99835 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.27■■□□□ 1.16
SMOQ99835 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.27■■□□□ 1.16
SMOQ99835 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SMOQ99835 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.26■■□□□ 1.15
SMOQ99835 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.26■■□□□ 1.15
SMOQ99835 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.26■■□□□ 1.15
SMOQ99835 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMOQ99835 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMOQ99835 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMOQ99835 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SMOQ99835 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.25■■□□□ 1.15
SMOQ99835 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.25■■□□□ 1.15
SMOQ99835 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
SMOQ99835 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMOQ99835 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMOQ99835 AC008175.2-201ENST00000612840 297 ntBASIC22.25■■□□□ 1.15
SMOQ99835 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.25■■□□□ 1.15
SMOQ99835 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.25■■□□□ 1.15
SMOQ99835 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.24■■□□□ 1.15
SMOQ99835 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
SMOQ99835 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.24■■□□□ 1.15
SMOQ99835 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.24■■□□□ 1.15
SMOQ99835 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 POU5F1P4-201ENST00000413175 1085 ntBASIC22.24■■□□□ 1.15
SMOQ99835 CDCA4P2-201ENST00000441182 718 ntBASIC22.24■■□□□ 1.15
SMOQ99835 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.24■■□□□ 1.15
SMOQ99835 AC090192.1-201ENST00000517740 490 ntBASIC22.24■■□□□ 1.15
SMOQ99835 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SMOQ99835 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.24■■□□□ 1.15
SMOQ99835 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.24■■□□□ 1.15
SMOQ99835 RAP2CP1-201ENST00000605103 478 ntBASIC22.24■■□□□ 1.15
SMOQ99835 AC073111.5-205ENST00000641717 521 ntBASIC22.24■■□□□ 1.15
SMOQ99835 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
SMOQ99835 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMOQ99835 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.23■■□□□ 1.15
SMOQ99835 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.23■■□□□ 1.15
SMOQ99835 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SMOQ99835 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.23■■□□□ 1.15
SMOQ99835 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.23■■□□□ 1.15
SMOQ99835 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SMOQ99835 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMOQ99835 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.23■■□□□ 1.15
SMOQ99835 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SMOQ99835 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMOQ99835 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMOQ99835 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
SMOQ99835 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.22■■□□□ 1.15
SMOQ99835 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMOQ99835 SLC7A5P1-201ENST00000568957 537 ntBASIC22.22■■□□□ 1.15
SMOQ99835 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.22■■□□□ 1.15
SMOQ99835 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
SMOQ99835 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms