Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LITAFQ99732 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.11□□□□□ -0.15
LITAFQ99732 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.11□□□□□ -0.15
LITAFQ99732 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LITAFQ99732 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 ABHD17AP4-201ENST00000411545 909 ntBASIC14.11□□□□□ -0.15
LITAFQ99732 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.11□□□□□ -0.15
LITAFQ99732 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 THA1P-201ENST00000590384 1145 ntBASIC14.11□□□□□ -0.15
LITAFQ99732 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LITAFQ99732 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.11□□□□□ -0.15
LITAFQ99732 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.11□□□□□ -0.15
LITAFQ99732 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.11□□□□□ -0.15
LITAFQ99732 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.11□□□□□ -0.15
LITAFQ99732 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
LITAFQ99732 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LITAFQ99732 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LITAFQ99732 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.1□□□□□ -0.15
LITAFQ99732 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.1□□□□□ -0.15
LITAFQ99732 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
LITAFQ99732 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 AC079089.2-201ENST00000531211 1277 ntBASIC14.1□□□□□ -0.15
LITAFQ99732 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LITAFQ99732 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LITAFQ99732 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LITAFQ99732 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LITAFQ99732 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.1□□□□□ -0.15
LITAFQ99732 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.1□□□□□ -0.15
LITAFQ99732 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LITAFQ99732 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.1□□□□□ -0.15
LITAFQ99732 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.1□□□□□ -0.15
LITAFQ99732 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.09□□□□□ -0.15
LITAFQ99732 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.09□□□□□ -0.15
LITAFQ99732 SNX5-217ENST00000606557 1087 ntBASIC14.09□□□□□ -0.15
LITAFQ99732 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LITAFQ99732 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.09□□□□□ -0.15
LITAFQ99732 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.09□□□□□ -0.15
LITAFQ99732 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.09□□□□□ -0.15
LITAFQ99732 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
LITAFQ99732 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LITAFQ99732 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
LITAFQ99732 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.08□□□□□ -0.15
LITAFQ99732 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LITAFQ99732 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
LITAFQ99732 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.08□□□□□ -0.16
LITAFQ99732 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.08□□□□□ -0.16
LITAFQ99732 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.08□□□□□ -0.16
LITAFQ99732 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LITAFQ99732 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LITAFQ99732 GPX1-201ENST00000419349 1106 ntBASIC14.08□□□□□ -0.16
LITAFQ99732 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LITAFQ99732 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LITAFQ99732 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LITAFQ99732 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LITAFQ99732 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LITAFQ99732 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
LITAFQ99732 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LITAFQ99732 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LITAFQ99732 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.07□□□□□ -0.16
LITAFQ99732 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.07□□□□□ -0.16
LITAFQ99732 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LITAFQ99732 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LITAFQ99732 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LITAFQ99732 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LITAFQ99732 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LITAFQ99732 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms