Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC004854.2-201ENST00000608450 1441 ntBASIC19.41■□□□□ 0.7
TIMP4Q99727 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMP4Q99727 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMP4Q99727 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP4Q99727 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP4Q99727 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TIMP4Q99727 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMP4Q99727 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP4Q99727 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP4Q99727 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMP4Q99727 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.4■□□□□ 0.7
TIMP4Q99727 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.4■□□□□ 0.7
TIMP4Q99727 AC004911.1-201ENST00000416316 871 ntBASIC19.4■□□□□ 0.7
TIMP4Q99727 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.4■□□□□ 0.7
TIMP4Q99727 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMP4Q99727 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.4■□□□□ 0.7
TIMP4Q99727 AC079140.4-201ENST00000507448 529 ntBASIC19.4■□□□□ 0.7
TIMP4Q99727 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
TIMP4Q99727 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP4Q99727 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP4Q99727 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP4Q99727 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP4Q99727 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMP4Q99727 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP4Q99727 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.39■□□□□ 0.69
TIMP4Q99727 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.39■□□□□ 0.69
TIMP4Q99727 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.39■□□□□ 0.69
TIMP4Q99727 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.39■□□□□ 0.69
TIMP4Q99727 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP4Q99727 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.39■□□□□ 0.69
TIMP4Q99727 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP4Q99727 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.39■□□□□ 0.69
TIMP4Q99727 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.39■□□□□ 0.69
TIMP4Q99727 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP4Q99727 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP4Q99727 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP4Q99727 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.38■□□□□ 0.69
TIMP4Q99727 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.38■□□□□ 0.69
TIMP4Q99727 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP4Q99727 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP4Q99727 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.38■□□□□ 0.69
TIMP4Q99727 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.38■□□□□ 0.69
TIMP4Q99727 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
TIMP4Q99727 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP4Q99727 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TIMP4Q99727 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.38■□□□□ 0.69
TIMP4Q99727 OR7E47P-201ENST00000546390 1422 ntBASIC19.38■□□□□ 0.69
TIMP4Q99727 RARRES2P11-201ENST00000635158 484 ntBASIC19.38■□□□□ 0.69
TIMP4Q99727 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP4Q99727 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TIMP4Q99727 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TIMP4Q99727 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TIMP4Q99727 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TIMP4Q99727 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TIMP4Q99727 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.37■□□□□ 0.69
TIMP4Q99727 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.37■□□□□ 0.69
TIMP4Q99727 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP4Q99727 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP4Q99727 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP4Q99727 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
TIMP4Q99727 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP4Q99727 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP4Q99727 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP4Q99727 KRT19P1-201ENST00000405746 1186 ntBASIC19.36■□□□□ 0.69
TIMP4Q99727 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.36■□□□□ 0.69
TIMP4Q99727 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.36■□□□□ 0.69
TIMP4Q99727 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP4Q99727 AC244015.2-201ENST00000616358 1861 ntBASIC19.36■□□□□ 0.69
TIMP4Q99727 AP004607.7-201ENST00000527152 1677 ntBASIC19.36■□□□□ 0.69
TIMP4Q99727 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP4Q99727 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP4Q99727 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
TIMP4Q99727 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.35■□□□□ 0.69
TIMP4Q99727 AC137761.2-201ENST00000561729 223 ntBASIC19.35■□□□□ 0.69
TIMP4Q99727 AC145350.3-201ENST00000569033 163 ntBASIC19.35■□□□□ 0.69
TIMP4Q99727 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.35■□□□□ 0.69
TIMP4Q99727 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP4Q99727 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms