Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RPRD1AQ96P16 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPRD1AQ96P16 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.81■■□□□ 1.08
RPRD1AQ96P16 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
RPRD1AQ96P16 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 AC006015.1-201ENST00000429970 570 ntBASIC21.79■■□□□ 1.08
RPRD1AQ96P16 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
RPRD1AQ96P16 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 AC004911.1-201ENST00000416316 871 ntBASIC21.78■■□□□ 1.08
RPRD1AQ96P16 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.78■■□□□ 1.08
RPRD1AQ96P16 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RPRD1AQ96P16 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 AC008175.2-201ENST00000612840 297 ntBASIC21.77■■□□□ 1.08
RPRD1AQ96P16 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPRD1AQ96P16 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RPRD1AQ96P16 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RPRD1AQ96P16 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 KRT18P11-201ENST00000435214 1283 ntBASIC21.76■■□□□ 1.07
RPRD1AQ96P16 UBE2DNL-204ENST00000602536 740 ntBASIC21.76■■□□□ 1.07
RPRD1AQ96P16 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPRD1AQ96P16 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPRD1AQ96P16 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms