Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
SPG11Q96JI7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.05■□□□□ 0.48
SPG11Q96JI7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPG11Q96JI7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPG11Q96JI7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 LINC00526-201ENST00000581067 1875 ntBASIC18.04■□□□□ 0.48
SPG11Q96JI7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPG11Q96JI7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPG11Q96JI7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPG11Q96JI7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPG11Q96JI7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPG11Q96JI7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.04■□□□□ 0.48
SPG11Q96JI7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPG11Q96JI7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 LINC01023-201ENST00000606054 436 ntBASIC18.03■□□□□ 0.48
SPG11Q96JI7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPG11Q96JI7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPG11Q96JI7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPG11Q96JI7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPG11Q96JI7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPG11Q96JI7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPG11Q96JI7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPG11Q96JI7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.03■□□□□ 0.48
SPG11Q96JI7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPG11Q96JI7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.02■□□□□ 0.48
SPG11Q96JI7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPG11Q96JI7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPG11Q96JI7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.02■□□□□ 0.48
SPG11Q96JI7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPG11Q96JI7 AL034346.1-201ENST00000568244 1277 ntBASIC18.02■□□□□ 0.48
SPG11Q96JI7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.02■□□□□ 0.48
SPG11Q96JI7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPG11Q96JI7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SPG11Q96JI7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
SPG11Q96JI7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.02■□□□□ 0.48
SPG11Q96JI7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPG11Q96JI7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SPG11Q96JI7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SPG11Q96JI7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.02■□□□□ 0.47
SPG11Q96JI7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.02■□□□□ 0.47
SPG11Q96JI7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPG11Q96JI7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPG11Q96JI7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.01■□□□□ 0.47
SPG11Q96JI7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPG11Q96JI7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.01■□□□□ 0.47
SPG11Q96JI7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPG11Q96JI7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPG11Q96JI7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPG11Q96JI7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SPG11Q96JI7 AP006587.3-201ENST00000525742 1516 ntBASIC18.01■□□□□ 0.47
SPG11Q96JI7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SPG11Q96JI7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPG11Q96JI7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPG11Q96JI7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.01■□□□□ 0.47
SPG11Q96JI7 AC008403.3-201ENST00000598924 454 ntBASIC18.01■□□□□ 0.47
SPG11Q96JI7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPG11Q96JI7 AL591742.1-201ENST00000604433 565 ntBASIC18.01■□□□□ 0.47
SPG11Q96JI7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.01■□□□□ 0.47
SPG11Q96JI7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.01■□□□□ 0.47
SPG11Q96JI7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.01■□□□□ 0.47
SPG11Q96JI7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPG11Q96JI7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 RPPH1-201ENST00000516869 333 ntBASIC18■□□□□ 0.47
SPG11Q96JI7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18■□□□□ 0.47
SPG11Q96JI7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18■□□□□ 0.47
SPG11Q96JI7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 AL355472.2-201ENST00000422958 438 ntBASIC18■□□□□ 0.47
SPG11Q96JI7 OR2A1-AS1-201ENST00000462305 773 ntBASIC18■□□□□ 0.47
SPG11Q96JI7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18■□□□□ 0.47
SPG11Q96JI7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPG11Q96JI7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms