Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.15■■□□□ 1.14
RNF25Q96BH1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF25Q96BH1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RNF25Q96BH1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF25Q96BH1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RNF25Q96BH1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF25Q96BH1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RNF25Q96BH1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF25Q96BH1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF25Q96BH1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.14■■□□□ 1.14
RNF25Q96BH1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF25Q96BH1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF25Q96BH1 AC099791.1-201ENST00000416440 715 ntBASIC22.14■■□□□ 1.13
RNF25Q96BH1 IGHV3-19-201ENST00000521488 291 ntBASIC22.14■■□□□ 1.13
RNF25Q96BH1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.14■■□□□ 1.13
RNF25Q96BH1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF25Q96BH1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF25Q96BH1 AP006587.3-201ENST00000525742 1516 ntBASIC22.14■■□□□ 1.13
RNF25Q96BH1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF25Q96BH1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.14■■□□□ 1.13
RNF25Q96BH1 AL157384.1-201ENST00000445995 2473 ntBASIC22.14■■□□□ 1.13
RNF25Q96BH1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF25Q96BH1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF25Q96BH1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF25Q96BH1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF25Q96BH1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RNF25Q96BH1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RNF25Q96BH1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF25Q96BH1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF25Q96BH1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF25Q96BH1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF25Q96BH1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RNF25Q96BH1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF25Q96BH1 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.13■■□□□ 1.13
RNF25Q96BH1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF25Q96BH1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RNF25Q96BH1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF25Q96BH1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF25Q96BH1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF25Q96BH1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF25Q96BH1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF25Q96BH1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF25Q96BH1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
RNF25Q96BH1 AC106739.1-201ENST00000617035 715 ntBASIC22.12■■□□□ 1.13
RNF25Q96BH1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF25Q96BH1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF25Q96BH1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF25Q96BH1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF25Q96BH1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 SERPINA7P1-201ENST00000443077 631 ntBASIC22.11■■□□□ 1.13
RNF25Q96BH1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF25Q96BH1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF25Q96BH1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF25Q96BH1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF25Q96BH1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF25Q96BH1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF25Q96BH1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF25Q96BH1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF25Q96BH1 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.1■■□□□ 1.13
RNF25Q96BH1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 AC110285.6-201ENST00000617652 491 ntBASIC22.1■■□□□ 1.13
RNF25Q96BH1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RNF25Q96BH1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF25Q96BH1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF25Q96BH1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF25Q96BH1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF25Q96BH1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF25Q96BH1 TSPY26P-201ENST00000476365 1326 ntBASIC22.09■■□□□ 1.13
RNF25Q96BH1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
RNF25Q96BH1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms