Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 YBX1P1-201ENST00000445822 960 ntBASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOBEC3DQ96AK3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 AC079140.4-201ENST00000507448 529 ntBASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOBEC3DQ96AK3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APOBEC3DQ96AK3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
APOBEC3DQ96AK3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms