Protein–RNA interactions for Protein: Q96A61

TRIM52, Tripartite motif-containing protein 52, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM52Q96A61 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM52Q96A61 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.39■■■□□ 2.62
TRIM52Q96A61 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM52Q96A61 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM52Q96A61 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.39■■■□□ 2.62
TRIM52Q96A61 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.39■■■□□ 2.62
TRIM52Q96A61 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.39■■■□□ 2.62
TRIM52Q96A61 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC31.39■■■□□ 2.62
TRIM52Q96A61 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.39■■■□□ 2.62
TRIM52Q96A61 FAM99A-202ENST00000538190 1989 ntBASIC31.39■■■□□ 2.62
TRIM52Q96A61 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM52Q96A61 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM52Q96A61 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC31.39■■■□□ 2.61
TRIM52Q96A61 AC010542.4-201ENST00000563151 1910 ntBASIC31.38■■■□□ 2.61
TRIM52Q96A61 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM52Q96A61 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM52Q96A61 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM52Q96A61 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM52Q96A61 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.38■■■□□ 2.61
TRIM52Q96A61 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM52Q96A61 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.38■■■□□ 2.61
TRIM52Q96A61 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.38■■■□□ 2.61
TRIM52Q96A61 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
TRIM52Q96A61 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM52Q96A61 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.38■■■□□ 2.61
TRIM52Q96A61 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM52Q96A61 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM52Q96A61 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM52Q96A61 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM52Q96A61 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM52Q96A61 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM52Q96A61 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM52Q96A61 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM52Q96A61 AC012676.1-201ENST00000574705 1949 ntBASIC31.37■■■□□ 2.61
TRIM52Q96A61 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM52Q96A61 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM52Q96A61 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM52Q96A61 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM52Q96A61 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC31.36■■■□□ 2.61
TRIM52Q96A61 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM52Q96A61 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC31.36■■■□□ 2.61
TRIM52Q96A61 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
TRIM52Q96A61 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM52Q96A61 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
TRIM52Q96A61 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.36■■■□□ 2.61
TRIM52Q96A61 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.36■■■□□ 2.61
TRIM52Q96A61 AC010536.3-201ENST00000620306 533 ntBASIC31.36■■■□□ 2.61
TRIM52Q96A61 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM52Q96A61 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM52Q96A61 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM52Q96A61 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM52Q96A61 AC007322.1-201ENST00000426983 750 ntBASIC31.35■■■□□ 2.61
TRIM52Q96A61 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.35■■■□□ 2.61
TRIM52Q96A61 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.35■■■□□ 2.61
TRIM52Q96A61 AC231657.2-201ENST00000624556 255 ntBASIC31.35■■■□□ 2.61
TRIM52Q96A61 GUSBP5-202ENST00000510805 1989 ntBASIC31.35■■■□□ 2.61
TRIM52Q96A61 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM52Q96A61 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31.34■■■□□ 2.61
TRIM52Q96A61 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM52Q96A61 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM52Q96A61 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.34■■■□□ 2.61
TRIM52Q96A61 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC31.34■■■□□ 2.61
TRIM52Q96A61 AC008175.2-201ENST00000612840 297 ntBASIC31.34■■■□□ 2.61
TRIM52Q96A61 AL050303.2-201ENST00000619798 666 ntBASIC31.34■■■□□ 2.61
TRIM52Q96A61 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
TRIM52Q96A61 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC31.34■■■□□ 2.61
TRIM52Q96A61 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
TRIM52Q96A61 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
TRIM52Q96A61 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
TRIM52Q96A61 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM52Q96A61 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM52Q96A61 CNN2P6-201ENST00000439038 900 ntBASIC31.33■■■□□ 2.61
TRIM52Q96A61 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.33■■■□□ 2.61
TRIM52Q96A61 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM52Q96A61 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM52Q96A61 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM52Q96A61 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM52Q96A61 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM52Q96A61 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC31.33■■■□□ 2.61
TRIM52Q96A61 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC31.33■■■□□ 2.61
TRIM52Q96A61 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
TRIM52Q96A61 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
TRIM52Q96A61 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM52Q96A61 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM52Q96A61 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.32■■■□□ 2.6
TRIM52Q96A61 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.32■■■□□ 2.6
TRIM52Q96A61 AC242852.2-201ENST00000615738 1807 ntBASIC31.32■■■□□ 2.6
TRIM52Q96A61 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM52Q96A61 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM52Q96A61 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM52Q96A61 AC061975.6-201ENST00000579045 1553 ntBASIC31.31■■■□□ 2.6
TRIM52Q96A61 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC31.31■■■□□ 2.6
TRIM52Q96A61 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM52Q96A61 BMP1-204ENST00000397814 836 ntTSL 4 BASIC31.31■■■□□ 2.6
TRIM52Q96A61 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC31.31■■■□□ 2.6
TRIM52Q96A61 NCF1B-203ENST00000435988 1254 ntBASIC31.31■■■□□ 2.6
TRIM52Q96A61 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC31.31■■■□□ 2.6
TRIM52Q96A61 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC31.31■■■□□ 2.6
TRIM52Q96A61 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
TRIM52Q96A61 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms