Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2E3Q969T4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2E3Q969T4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.33■□□□□ 0.84
UBE2E3Q969T4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2E3Q969T4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2E3Q969T4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 MIR6084-201ENST00000622012 110 ntBASIC20.32■□□□□ 0.84
UBE2E3Q969T4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
UBE2E3Q969T4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 AC026310.3-201ENST00000625186 2373 ntBASIC20.31■□□□□ 0.84
UBE2E3Q969T4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.31■□□□□ 0.84
UBE2E3Q969T4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2E3Q969T4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE2E3Q969T4 AC007375.3-201ENST00000600936 2314 ntBASIC20.28■□□□□ 0.84
UBE2E3Q969T4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 LINC02228-203ENST00000641970 1355 ntBASIC20.28■□□□□ 0.84
UBE2E3Q969T4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms