Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ATP6V0A1Q93050 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP6V0A1Q93050 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 TSPY6P-201ENST00000448518 926 ntBASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 KRT18P20-201ENST00000548986 1279 ntBASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ATP6V0A1Q93050 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 AC142086.2-201ENST00000569753 217 ntBASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 AC012676.1-201ENST00000574705 1949 ntBASIC23.71■■□□□ 1.39
ATP6V0A1Q93050 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
ATP6V0A1Q93050 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
ATP6V0A1Q93050 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
ATP6V0A1Q93050 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 SLC7A5P2-201ENST00000553010 536 ntBASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 AC010536.3-201ENST00000620306 533 ntBASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 ECEL1P1-201ENST00000373592 1742 ntBASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 AC026471.6-201ENST00000622954 1905 ntBASIC23.69■■□□□ 1.38
ATP6V0A1Q93050 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 GUSBP6-202ENST00000438529 1198 ntBASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 CNN2P6-201ENST00000439038 900 ntBASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.68■■□□□ 1.38
ATP6V0A1Q93050 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 ABHD17AP1-201ENST00000358206 933 ntBASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A1Q93050 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 AC008175.2-201ENST00000612840 297 ntBASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A1Q93050 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms