Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.46■□□□□ 0.71
CNOT9Q92600 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.46■□□□□ 0.71
CNOT9Q92600 MIR638-201ENST00000385237 100 ntBASIC19.46■□□□□ 0.71
CNOT9Q92600 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT9Q92600 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT9Q92600 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CNOT9Q92600 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT9Q92600 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT9Q92600 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT9Q92600 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CNOT9Q92600 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT9Q92600 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNOT9Q92600 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT9Q92600 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CNOT9Q92600 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.45■□□□□ 0.7
CNOT9Q92600 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CNOT9Q92600 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT9Q92600 AC012414.1-201ENST00000556676 535 ntBASIC19.45■□□□□ 0.7
CNOT9Q92600 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT9Q92600 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT9Q92600 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT9Q92600 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT9Q92600 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CNOT9Q92600 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CNOT9Q92600 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.44■□□□□ 0.7
CNOT9Q92600 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT9Q92600 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT9Q92600 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT9Q92600 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.44■□□□□ 0.7
CNOT9Q92600 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.44■□□□□ 0.7
CNOT9Q92600 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT9Q92600 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.44■□□□□ 0.7
CNOT9Q92600 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT9Q92600 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.43■□□□□ 0.7
CNOT9Q92600 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.43■□□□□ 0.7
CNOT9Q92600 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.43■□□□□ 0.7
CNOT9Q92600 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CNOT9Q92600 AC105265.2-201ENST00000467189 838 ntBASIC19.43■□□□□ 0.7
CNOT9Q92600 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.43■□□□□ 0.7
CNOT9Q92600 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CNOT9Q92600 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT9Q92600 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT9Q92600 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.43■□□□□ 0.7
CNOT9Q92600 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CNOT9Q92600 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.42■□□□□ 0.7
CNOT9Q92600 MIR6084-201ENST00000622012 110 ntBASIC19.42■□□□□ 0.7
CNOT9Q92600 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.42■□□□□ 0.7
CNOT9Q92600 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT9Q92600 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.42■□□□□ 0.7
CNOT9Q92600 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CNOT9Q92600 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
CNOT9Q92600 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CNOT9Q92600 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CNOT9Q92600 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.41■□□□□ 0.7
CNOT9Q92600 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.41■□□□□ 0.7
CNOT9Q92600 AL354811.1-201ENST00000610286 706 ntBASIC19.41■□□□□ 0.7
CNOT9Q92600 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNOT9Q92600 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT9Q92600 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms