Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 AL024507.2-201ENST00000606070 2574 ntBASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 YBX1P1-201ENST00000445822 960 ntBASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SCFD1Q8WVM8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 LINC02228-203ENST00000641970 1355 ntBASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 AC123595.1-201ENST00000440769 1046 ntBASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 EEF1DP3-203ENST00000566025 782 ntBASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SCFD1Q8WVM8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.31
SCFD1Q8WVM8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCFD1Q8WVM8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 TERF1P2-201ENST00000583350 1212 ntBASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
SCFD1Q8WVM8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 AC079140.4-201ENST00000507448 529 ntBASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCFD1Q8WVM8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCFD1Q8WVM8 AC053503.5-201ENST00000601508 636 ntBASIC23.23■■□□□ 1.31
SCFD1Q8WVM8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.23■■□□□ 1.31
SCFD1Q8WVM8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCFD1Q8WVM8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SCFD1Q8WVM8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCFD1Q8WVM8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCFD1Q8WVM8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 KRT87P-202ENST00000534226 1464 ntBASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms