Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 LINC02228-203ENST00000641970 1355 ntBASIC20.77■□□□□ 0.92
HMGCLL1Q8TB92 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCLL1Q8TB92 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
HMGCLL1Q8TB92 AC097381.1-201ENST00000429019 1296 ntBASIC20.77■□□□□ 0.92
HMGCLL1Q8TB92 MIR6821-201ENST00000617625 74 ntBASIC20.77■□□□□ 0.92
HMGCLL1Q8TB92 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCLL1Q8TB92 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCLL1Q8TB92 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.77■□□□□ 0.92
HMGCLL1Q8TB92 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGCLL1Q8TB92 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.77■□□□□ 0.91
HMGCLL1Q8TB92 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGCLL1Q8TB92 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGCLL1Q8TB92 AC005224.4-201ENST00000583262 1652 ntBASIC20.77■□□□□ 0.91
HMGCLL1Q8TB92 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.77■□□□□ 0.91
HMGCLL1Q8TB92 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGCLL1Q8TB92 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 AL157384.1-201ENST00000445995 2473 ntBASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLL1Q8TB92 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 AC026271.2-201ENST00000428091 497 ntBASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 TERF1P2-201ENST00000583350 1212 ntBASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCLL1Q8TB92 AC055733.4-201ENST00000638462 1354 ntBASIC20.73■□□□□ 0.91
HMGCLL1Q8TB92 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCLL1Q8TB92 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCLL1Q8TB92 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCLL1Q8TB92 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCLL1Q8TB92 AP006587.3-201ENST00000525742 1516 ntBASIC20.73■□□□□ 0.91
HMGCLL1Q8TB92 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 RARRES2P6-201ENST00000567333 442 ntBASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCLL1Q8TB92 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCLL1Q8TB92 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms