Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 KRT18P14-201ENST00000534205 1250 ntBASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 TPRG1LP1-201ENST00000598702 760 ntBASIC24.79■■□□□ 1.56
SMARCC2Q8TAQ2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 TERF1P2-201ENST00000583350 1212 ntBASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.78■■□□□ 1.56
SMARCC2Q8TAQ2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 AF106564.1-201ENST00000607058 2553 ntBASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMARCC2Q8TAQ2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SMARCC2Q8TAQ2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMARCC2Q8TAQ2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 AL024507.2-201ENST00000606070 2574 ntBASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMARCC2Q8TAQ2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms