Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC061975.6-201ENST00000579045 1553 ntBASIC26.19■■□□□ 1.78
RTL9Q8NET4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
RTL9Q8NET4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTL9Q8NET4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTL9Q8NET4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTL9Q8NET4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.19■■□□□ 1.78
RTL9Q8NET4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.19■■□□□ 1.78
RTL9Q8NET4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTL9Q8NET4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RTL9Q8NET4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTL9Q8NET4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTL9Q8NET4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RTL9Q8NET4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RTL9Q8NET4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RTL9Q8NET4 AL512625.2-201ENST00000417533 625 ntBASIC26.18■■□□□ 1.78
RTL9Q8NET4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.18■■□□□ 1.78
RTL9Q8NET4 C1orf229-201ENST00000623686 2258 ntBASIC26.18■■□□□ 1.78
RTL9Q8NET4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.18■■□□□ 1.78
RTL9Q8NET4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RTL9Q8NET4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.17■■□□□ 1.78
RTL9Q8NET4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTL9Q8NET4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTL9Q8NET4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTL9Q8NET4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTL9Q8NET4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.17■■□□□ 1.78
RTL9Q8NET4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTL9Q8NET4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RTL9Q8NET4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTL9Q8NET4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTL9Q8NET4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 AC133041.1-202ENST00000642053 222 ntBASIC26.16■■□□□ 1.78
RTL9Q8NET4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.16■■□□□ 1.78
RTL9Q8NET4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RTL9Q8NET4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
RTL9Q8NET4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.15■■□□□ 1.78
RTL9Q8NET4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTL9Q8NET4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTL9Q8NET4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTL9Q8NET4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTL9Q8NET4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.15■■□□□ 1.78
RTL9Q8NET4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.15■■□□□ 1.78
RTL9Q8NET4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTL9Q8NET4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTL9Q8NET4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.15■■□□□ 1.78
RTL9Q8NET4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTL9Q8NET4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.14■■□□□ 1.78
RTL9Q8NET4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
RTL9Q8NET4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTL9Q8NET4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.14■■□□□ 1.78
RTL9Q8NET4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTL9Q8NET4 AC093787.1-201ENST00000450396 207 ntBASIC26.14■■□□□ 1.78
RTL9Q8NET4 AC069236.1-201ENST00000604339 616 ntBASIC26.14■■□□□ 1.78
RTL9Q8NET4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTL9Q8NET4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTL9Q8NET4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.14■■□□□ 1.77
RTL9Q8NET4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RTL9Q8NET4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RTL9Q8NET4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RTL9Q8NET4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.14■■□□□ 1.77
RTL9Q8NET4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.14■■□□□ 1.77
RTL9Q8NET4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RTL9Q8NET4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.13■■□□□ 1.77
RTL9Q8NET4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
RTL9Q8NET4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RTL9Q8NET4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RTL9Q8NET4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.13■■□□□ 1.77
RTL9Q8NET4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.13■■□□□ 1.77
RTL9Q8NET4 AC016405.3-201ENST00000607710 860 ntBASIC26.13■■□□□ 1.77
RTL9Q8NET4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
RTL9Q8NET4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RTL9Q8NET4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTL9Q8NET4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTL9Q8NET4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTL9Q8NET4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RTL9Q8NET4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTL9Q8NET4 MKRN4P-201ENST00000444706 1521 ntBASIC26.13■■□□□ 1.77
RTL9Q8NET4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTL9Q8NET4 MIPEPP3-201ENST00000412105 444 ntBASIC26.12■■□□□ 1.77
RTL9Q8NET4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTL9Q8NET4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTL9Q8NET4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.12■■□□□ 1.77
RTL9Q8NET4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.12■■□□□ 1.77
RTL9Q8NET4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.12■■□□□ 1.77
RTL9Q8NET4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.12■■□□□ 1.77
RTL9Q8NET4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTL9Q8NET4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.12■■□□□ 1.77
RTL9Q8NET4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
RTL9Q8NET4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.12■■□□□ 1.77
RTL9Q8NET4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.11■■□□□ 1.77
RTL9Q8NET4 AC092118.2-201ENST00000613495 667 ntBASIC26.11■■□□□ 1.77
RTL9Q8NET4 AC026471.6-201ENST00000622954 1905 ntBASIC26.11■■□□□ 1.77
RTL9Q8NET4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms