Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRFBP1Q8NEF9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.16■□□□□ 0.82
SRFBP1Q8NEF9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRFBP1Q8NEF9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SRFBP1Q8NEF9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.16■□□□□ 0.82
SRFBP1Q8NEF9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRFBP1Q8NEF9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRFBP1Q8NEF9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRFBP1Q8NEF9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFBP1Q8NEF9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SRFBP1Q8NEF9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SRFBP1Q8NEF9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SRFBP1Q8NEF9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 TERF1P2-201ENST00000583350 1212 ntBASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 AC053503.5-201ENST00000601508 636 ntBASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SRFBP1Q8NEF9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 KRT87P-202ENST00000534226 1464 ntBASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SRFBP1Q8NEF9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 EEF1DP3-203ENST00000566025 782 ntBASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFBP1Q8NEF9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 KRT18P14-201ENST00000534205 1250 ntBASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 CCDC92B-201ENST00000575506 885 ntBASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.11■□□□□ 0.81
SRFBP1Q8NEF9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.1■□□□□ 0.81
SRFBP1Q8NEF9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SRFBP1Q8NEF9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SRFBP1Q8NEF9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SRFBP1Q8NEF9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SRFBP1Q8NEF9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms